COVID-19 outbreak in Herat Prison: an exercise of basic biostatistical analysis
Shoaib Naeemi, Khwaja Mir Islam Saeed, Mir Salamuddin Hakim
Corresponding author: Shoaib Naeemi, Eastern Mediterranean Public Health Network (EMPHNET) Afghanistan Country Office, Afghanistan 
Received: 25 Dec 2024 - Accepted: 25 Oct 2025 - Published: 17 Feb 2026
Domain: Biostatistics,Epidemiology,Public health
Keywords: Biostatistics, epidemiology, outbreak, Afghanistan
Funding: This work received no specific grant from any funding agency in the public, commercial, or non-profit sectors.
This article is published as part of the supplement Teaching Case Studies in Field Epidemiology and Public Health for the Eastern Mediterranean Region, commissioned by Eastern Mediterranean Public Health Network (EMPHNET).
©Shoaib Naeemi et al. Pan African Medical Journal (ISSN: 1937-8688). This is an Open Access article distributed under the terms of the Creative Commons Attribution International 4.0 License (https://creativecommons.org/licenses/by/4.0/), which permits unrestricted use, distribution, and reproduction in any medium, provided the original work is properly cited.
Cite this article: Shoaib Naeemi et al. COVID-19 outbreak in Herat Prison: an exercise of basic biostatistical analysis. Pan African Medical Journal. 2026;53(1):3. [doi: 10.11604/pamj.supp.2026.53.1.46340]
Available online at: https://www.panafrican-med-journal.com//content/series/53/1/3/full
COVID-19 outbreak in Herat Prison: an exercise of basic biostatistical analysis
Shoaib Naeemi1,&, Khwaja Mir Islam Saeed2, Mir Salamuddin Hakim2
&Corresponding author
Biostatistics plays a pivotal role in the field of epidemiology, particularly in the training programs aimed at equipping professionals with the necessary skills to effectively analyze and interpret data related to disease outbreaks. In the context of epidemiology, biostatistics provides a systematic framework for collecting, organizing, analyzing, and interpreting data, enabling epidemiologists to gain valuable insights into the patterns, determinants, and impact of diseases on populations. A comprehensive understanding of biostatistics is crucial for epidemiologists as they strive to identify risk factors, assess disease burden, and design appropriate public health interventions. This practical exercise which highlights the application of biostatistics in epidemiology, is the analysis of a line list from an outbreak that occurred in Herat Province prison, Afghanistan in July 2022. Using the principles of biostatistics, participants would be tasked with conducting a basic analysis of this line list. The exercise would also emphasize the importance of data visualization techniques. Participants would be encouraged to create graphs, such as bar and pie charts, to visualize the temporal distribution of cases and identify potential patterns or clusters. Through this exercise, participants would not only gain practical experience in utilizing biostatistical techniques but also understand the value of these methods in identifying key epidemiological features of an outbreak. By accurately analyzing the line list data, they would be able to identify risk factors, understand the mode of transmission, and inform public health interventions and control measures to mitigate the spread of the outbreak.
Time allotted: 1-2 Hours
Language: English
Groups: 3-5 residents per group
Materials required: pen, pencil, flip chart, calculator, marker, highlighter pen, ruler and personal computer (if available)
- Download the case study student guide;
- Request the case study facilitator guide.
The authors declare no competing interests.
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