Urinary stone analysis at the Military Hospital of Marrakech: Fourier transform infrared spectroscopic study
Kawtar Benkhaldoun, Errim Ahl Cheikh, Abderrahman Boukhira
Corresponding author: Kawtar Benkhaldoun, Biochemistry Department of the Avicenne Military Hospital, Faculty of Medicine and Pharmacy, Marrakech, Morocco 
Received: 23 Jun 2025 - Accepted: 12 Jul 2025 - Published: 24 Jul 2025
Domain: Laboratory medicine
Keywords: Urinary stones, composition, Fourier transform infrared spectroscopy
Funding: This work received no specific grant from any funding agency in the public, commercial, or non-profit sectors.
©Kawtar Benkhaldoun et al. Pan African Medical Journal (ISSN: 1937-8688). This is an Open Access article distributed under the terms of the Creative Commons Attribution International 4.0 License (https://creativecommons.org/licenses/by/4.0/), which permits unrestricted use, distribution, and reproduction in any medium, provided the original work is properly cited.
Cite this article: Kawtar Benkhaldoun et al. Urinary stone analysis at the Military Hospital of Marrakech: Fourier transform infrared spectroscopic study. Pan African Medical Journal. 2025;51:78. [doi: 10.11604/pamj.2025.51.78.48414]
Available online at: https://www.panafrican-med-journal.com//content/article/51/78/full
Case series 
Urinary stone analysis at the Military Hospital of Marrakech: Fourier transform infrared spectroscopic study
Urinary stone analysis at the Military Hospital of Marrakech: Fourier transform infrared spectroscopic study
Kawtar Benkhaldoun1,&, Errim Ahl Cheikh1, Abderrahman Boukhira1
&Corresponding author
Urolithiasis is a growing global health concern, influenced by a combination of genetic, environmental, and lifestyle factors. Accurate analysis of urinary stone composition is essential for effective diagnosis, treatment, and recurrence prevention. Fourier transform infrared (FTIR) spectroscopy has become a gold standard technique for stone analysis due to its precision and efficiency. This study aimed to evaluate the biochemical composition of urinary stones using FTIR spectroscopy and to identify trends related to patient demographics at the Avicenne Military Hospital in Marrakech. A total of 136 urinary stones were collected from patients between February 2020 and November 2023. Stone samples were analyzed using FTIR spectroscopy, and their composition was correlated with patient age and sex. Only the predominant constituent of each stone was considered for classification. The patient cohort included 82 men and 54 women, with an average age of 52.9 years. Calcium oxalate was the most prevalent component (35.3%), followed by struvite (20.5%), carbapatite + cystine (19.1%), and urate (13.2%). Mixed stones were common, with the majority containing two or more constituents. Calcium oxalate stones were more frequent in men, while struvite and urate stones were more associated with women and older age groups. Variations in stone composition were observed across different age and sex groups, reflecting underlying metabolic and infectious factors. Fourier transform infrared spectroscopy offers a reliable, rapid, and non-destructive method for analyzing urinary stone composition. Understanding the chemical makeup of stones provides essential insights for individualized patient management and targeted prevention strategies. This study highlights the importance of routine stone analysis in optimizing clinical care and reducing recurrence rates.
Urolithiasis, or the development of urinary calculi, represents a significant health issue with a multifactorial origin involving genetic predisposition, environmental influences, and lifestyle-related factors [1]. Its prevalence has been increasing worldwide over the past few decades [2-4]. Several types of urinary lithiasis have been described according to their physicochemical constituents and/or their morphology [5]. Understanding stone composition is crucial for developing a treatment strategy, defining the underlying cause, and preventing recurrence [2]. Infrared spectroscopy has become widely utilized in clinical practice and appears to be a powerful analytical and effective method for identifying and quantifying various constituents of urinary stones, including calcium, oxalate, uric acid, phosphate, acid, and others [6]. The objective of this work is to report the usefulness of the Fourier Transform Infrared spectroscopy technique in the study of the biochemical composition of stones in the Avicenne Military Hospital of Marrakech.
We collected a total of 136 urinary stones from 136 patients with lithiasis at the Biochemical Department of Avicenne Military Hospital between February 2020 and November 2023. The study included 136 patients-82 males and 54 females-aged between 19 and 80 years. Individuals with missing information on age or gender were excluded from the analysis. The stones were obtained from patients through various methods, including spontaneous passage, passage after extracorporeal shockwave lithotripsy, or during surgical removal. To ensure diverse samples, we selected only the initial calculation. Fourier transform infrared spectroscopy (FTIR) was used to analyze the stones that were presented to the stone analysis laboratory, avoiding duplicates from subsequent treatment sessions. Stone analysis was performed using Fourier Transform Infrared (FTIR) spectroscopy. Initially, the stones were washed with distilled water and thoroughly dried. After being crushed into a fine powder with a mortar and pestle, the stone samples were oven-dried at 100°C for 24 hours. A portion of 10 mg was mixed with 300 mg of potassium bromide, pressed manually into a pellet, and then placed in the FTIR spectrophotometer for analysis. Fourier transform infrared spectroscopy (FTIR) was used to analyze the stones that were presented to the stone analysis laboratory, avoiding duplicates from subsequent treatment sessions. Stone analysis was performed using Fourier transform infrared spectroscopy, which was conducted using a JASCO FT/IR-4600 instrument, covering a wave number range from 7800 to 350 cm-1. The identification of stone components was carried out by matching the infrared spectra obtained from each sample with a digital database containing reference spectra for both pure and mixed stone types. All analyses were conducted by trained personnel and independently verified to ensure precision and reliability. Considerable investment was made to obtain the JASCO FTIR equipment, and laboratory staff received specialized training to operate it effectively. Today, FTIR remains the preferred method for routine clinical characterization of urinary stone composition, due to its accuracy and efficiency.
Population characteristics: in our study, a total of 136 stones were analyzed from February 2020 to November 2023, with 82 stones from men and 54 from women, resulting in a sex ratio of 1.5. Patients had a mean age of 52.9 years. Age distribution showed that 29 stones originated from individuals aged 19 to 40, 66 from those between 41 and 60 years old, and 41 from patients in the 61 to 80 age group (Table 1).
Stone composition: urinary calculi can have a single or multiple constituents. However, for this study, only the predominant compound will be considered. Mixed-type calculi were predominant among the samples analyzed, with 113 stones consisting of two constituents and 19 stones consisting of three or more constituents. Calcium oxalate monohydrate (COM) in association with calcium oxalate dihydrate (COD) represented the most frequent compositional pattern (35 stones), followed by carbapatite/cystine (26 stones), struvite/newberyite (26 stones), ammonium acid urate (AAU)/struvite (11 stones), COM/AAU/carbapatite (7 stones), and AAU/COM (7 stones) (Table 2). Among all stone types, calcium oxalate appeared most frequently, representing 35.3% of cases, followed by struvite (20.5%), carbapatite + cystine (19.1%), urate (13.2%), and other components (11.8%) (Table 3).
Stone composition according to sex and age: in male patients, calcium oxalate stones were the most frequently identified (30 stones), followed by combinations of cystine and carbapatite (17 stones), struvite (17 stones), and ammonium acid urate (AAU) (13 stones), among others. Among females, calcium oxalate also ranked first (18 stones), with struvite (11 stones), cystine/carbapatite (9 stones), and AAU (5 stones) following. While calcium oxalate stones were the most prevalent in both sexes, they were more commonly observed in males. To assess the relationship between age and stone type, patients were categorized into six age groups: 19-30, 31-40, 41-50, 51-60, 61-70, and 71-80 years. The greatest concentration of stone cases occurred between the ages of 51 and 70 for men, and between 41 and 60 for women (Table 1).
Urolithiasis is a global medical issue that has seen an increased prevalence in the past two decades among both men and women. Additionally, there is a high recurrence rate of stone disease within five years, reaching up to 50% [7]. Various studies have revealed that the composition and structure of urinary stones provide valuable information about the stone formation process, influencing treatment plans and prognosis [8]. It is important to emphasize that analyzing the composition and microstructure of urinary stones is crucial as it offers insights into the stone's formation process, informing treatment strategies and prognosis.
Various techniques are currently employed to examine the composition of urinary stones, including both dry and wet chemical assays, X-ray powder diffraction, Raman spectroscopy, and Fourier Transform Infrared (FTIR) spectroscopy [9,10]. Since its introduction in 1955, FTIR has shown high sensitivity and accuracy in detecting stone constituents [11,12]. Thanks to its rapidity and specificity, it has become the most widely adopted technique for routine stone analysis. According to the European Association of Urology Guidelines on Urolithiasis, FTIR spectroscopy and X-ray diffraction are the recommended approaches, whereas traditional chemical tests are now considered obsolete [13]. A key advantage of FTIR lies in its ability to quickly identify a wide range of crystal types. However, effective use of this technique depends heavily on both the operator´s expertise and a thorough understanding of the analytical process.
Urolithiasis primarily affects individuals in their thirties and forties in industrialized nations. Although kidney stone disease has traditionally been more prevalent in men than women, recent research over the past decades indicates that the gap between the sexes is decreasing [14]. This trend may reflect changes in risk factors affecting stone formation differently in men and women. In particular, lifestyle modifications and a rise in obesity rates among women are thought to contribute to this evolving gender distribution [15]. Calcium oxalate (CaOx) was the most common urinary stone component, accounting for 35.3% of stones in both men and women in our study. It was followed by carbapatite + cysteine, struvite, urate, carbapatite, newberyite, and other components. These findings indicate significant variations in stone composition based on gender, age, anatomical localization, and geographical region.
The composition of urinary stones differs across regions globally, with calcium oxalate stones being the most commonly encountered type. Research has demonstrated that dietary intake of oxalate plays a significant role in influencing urinary oxalate levels [16,17]. Since urinary oxalate concentration is a key contributor to the formation of calcium oxalate stones, dietary modifications aimed at reducing oxalate consumption may help patients prevent stone recurrence [18]. Uric acid presence in stones is more common in men, with a rate of 9.6% compared to 3.7% in women. We found that the incidence of urate stones increases with age, which aligns with findings from two large stone analysis studies [19,20]. Furthermore, diabetes and insulin resistance, which are more prevalent with aging, lead to lower urinary pH and an increased likelihood of urate stone formation [21]. Being overweight may also contribute to the occurrence of uric lithiasis [22]. Struvite and carbapatite+cystine are the other prominent components, present in approximately 20.6% and 19.1% of cases, respectively. The remaining components are found in lower percentages. The chemical composition of certain calculi, such as carbapatite, struvite, and others, suggests the presence of urinary tract infection, likely due to hygiene issues, inadequate detection, or improper management [23].
Differentiating between various crystal forms can offer valuable insights into the activity and mechanisms underlying the formation of stones. A comprehensive understanding of these mechanisms is essential in order to provide suitable individualized treatment and effectively prevent recurrence for each patient. FT-IR spectroscopy has emerged as the optimal method for analyzing stones and is being recognized as the benchmark for stone analysis. It provides clear and precise identification of both major and minor components within the stone. Such detailed information is essential for tailoring appropriate treatment strategies.
What is known about this topic
- Urolithiasis is a common and recurrent condition, with calcium oxalate being the most frequent component;
- Stone composition varies by region, age, sex, and underlying metabolic and infectious causes;
- Fourier transform infrared spectroscopy is recognized as a reliable and rapid method for identifying urinary stone composition.
What this study adds
- Provides updated data on urinary stone composition in a Moroccan hospital over 3 years;
- Highlights the prevalence of mixed stone types and their distribution across age and sex groups;
- Confirms the practicality and diagnostic value of the FTIR spectroscopy in routine clinical settings in North Africa.
The authors declare no competing interests.
All the authors have read and agreed to the final version of this manuscript.
The authors would like to thank the staff of the biochemistry laboratory for their support and assistance throughout the course of this study.
Table 1: characteristics of urinary stones according to the gender of 70 patients
Table 2: distribution of stones composed of single or multiple components
Table 3: distribution of the main urinary stone constituents according to the gender of the patients
- Yasui T, Okada A, Hamamoto S, Ando R, Taguchi K, Tozawa K et al. Pathophysiology-based treatment of urolithiasis. International Journal of Urology. 2016;24(1):32-38. PubMed | Google Scholar
- Stamatelou KK, Francis ME, Jones CA, Nyberg LM, Curhan GC. Time trends in reported prevalence of kidney stones in the United States: 1976-1994. Kidney Int. 2003 May;63(5):1817-23. PubMed | Google Scholar
- Hesse A, Brändle E, Wilbert D, Köhrmann KU, Alken P. Study on the prevalence and incidence of urolithiasis in Germany comparing the years 1979 vs 2000. Eur Urol. 2003 Dec;44(6):709-13. PubMed | Google Scholar
- Trinchieri A, Coppi F, Montanari E, Del Nero A, Zanetti G, Pisani E. Increase in the prevalence of symptomatic upper urinary tract stones during the last ten years. Eur Urol. 2000 Jan;37(1):23-5. PubMed | Google Scholar
- Daudon M, Bader CA, Jungers P. Urinary calculi: review of classification methods and correlations with etiology. Scanning Microsc. 1993 Sep;7(3):1081-104 PubMed | Google Scholar
- Lee YH, Huang WC, Tsai JY, Lu CM, Chen WC, Lee MH et al. Epidemiological studies on the prevalence of upper urinary calculi in Taiwan. Urol Int. 2002;68(3):172-7. PubMed | Google Scholar
- Scales CD Jr, Smith AC, Hanley JM, Saigal CS; Urologic Diseases in America Project. Prevalence of kidney stones in the United States. Eur Urol. 2012 Jul;62(1):160-5. PubMed | Google Scholar
- Bouzidi H, de Brauwere D, Daudon M. Does urinary stone composition and morphology help for prediction of primary hyperparathyroidism. Nephrol Dial Transplant. 2011 Feb;26(2):565-72. PubMed | Google Scholar
- Abdel-Halim RE, Abdel-Halim MR. A review of urinary stone analysis techniques. Saudi Med J. 2006 Oct;27(10):1462-7. PubMed | Google Scholar
- Sutor DJ, Scheidt S. Identification standards for human urinary calculus components, using crystallographic methods. Br J Urol. 1968 Feb;40(1):22-8. PubMed | Google Scholar
- Primiano A, Persichilli S, Gambaro G, Ferraro PM, D'Addessi A, Cocci A et al. FT-IR analysis of urinary stones: a helpful tool for clinician comparison with the chemical spot test. Dis Markers. 2014:2014:176165. PubMed | Google Scholar
- Selvaraju R, Thiruppathi G, Raja A. FT-IR spectral studies on certain human urinary stones in the patients of rural area. Spectrochim Acta A Mol Biomol Spectrosc. 2012;93:260-265. PubMed | Google Scholar
- Türk C, Petřík A, Sarica K, Seitz C, Skolarikos A, Straub M et al. EAU guidelines on diagnosis and conservative management of urolithiasis. Eur Urol. 2016 Mar;69(3):468-74. PubMed | Google Scholar
- Cicerello E, Mangano MS, Cova G, Ciaccia M. Changing in gender prevalence of nephrolithiasis. Urologia. 2021 May;88(2):90-93. PubMed | Google Scholar
- Strope SA, Wolf JS Jr, Hollenbeck BK. Changes in gender distribution of urinary stone disease. Urology. 2010 Mar;75(3):543-6. PubMed | Google Scholar
- Holmes RP, Goodman HO, Assimos DG. Contribution of dietary oxalate to 16 oxalate excretion. Kidney Int. 2001 Jan;59(1):270-6. PubMed | Google Scholar
- Holmes RP, Ambrosius WT, Assimos DG. Dietary oxalate loads and renal oxalate handling. J Urol. 2005 Sep;174(3):943-7. PubMed | Google Scholar
- Shah S, Calle JC. Dietary and medical management of recurrent nephrolithiasis. Cleve Clin J Med. 2016 Jun;83(6):463-71. PubMed | Google Scholar
- Daudon M, Dore JC, Jungers P, Lacour B. Changes in stone composition according to age and gender of patients: a multivariate epidemiological approach. Urol Res. 2004 Jun;32(3):241-7. PubMed | Google Scholar
- Knoll T, Schubert AB, Fahlenkamp D, Leusmann DB, Wendt-Nordahl G, Schubert G. Urolithiasis through the ages: data on more than 200,000 urinary stone analyses. J Urol. 2011 Apr;185(4):1304-11. PubMed | Google Scholar
- Abate N, Chandalia M, Cabo-Chan AV Jr, Moe OW, Sakhaee K. The metabolic syndrome and uric acid nephrolithiasis: novel features of renal manifestation of insulin resistance. Kidney Int. 2004 Feb;65(2):386-92. PubMed | Google Scholar
- Ford ES, Giles WH, Dietz WH. Prevalence of the metabolic syndrome among US adults: 22 from the third National Health and Nutrition Examination Survey. JAMA. 2002 Jan 16;287(3):356-9. PubMed | Google Scholar
- Daudon M. Component analysis of urinary calculi in the etiologic diagnosis of urolithiasis in the child. Arch Pediatr. 2000 Aug;7(8):855-65. PubMed | Google Scholar



