Isolation of pathogenic bacteria from fomites in the operating rooms of a specialist hospital in Kano, Northwestern Nigeria
Emmanuel Nwankwo
The Pan African Medical Journal. 2012;12:90. doi:10.11604/pamj.2012.12.90.1307

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Isolation of pathogenic bacteria from fomites in the operating rooms of a specialist hospital in Kano, Northwestern Nigeria

Cite this: The Pan African Medical Journal. 2012;12:90. doi:10.11604/pamj.2012.12.90.1307

Received: 17/10/2011 - Accepted: 26/05/2012 - Published: 28/07/2012

Key words: Bacterial Pathogens, fomite, operating room, antibiotic susceptibility

© Emmanuel Nwankwo et al. The Pan African Medical Journal - ISSN 1937-8688. This is an Open Access article distributed under the terms of the Creative Commons Attribution License (, which permits unrestricted use, distribution, and reproduction in any medium, provided the original work is properly cited.

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Corresponding author: Emmanuel Nwankwo, Department of Microbiology and Parasitology, Faculty of Medicine, Bayero University, Kano, Nigeria (

Isolation of pathogenic bacteria from fomites in the operating rooms of a specialist hospital in Kano, Northwestern Nigeria


Emmanuel Nwankwo1,&


1Department of Microbiology and Parasitology, Faculty of Medicine, Bayero University, Kano, Nigeria



&Corresponding author
Emmanuel Nwankwo, Department of Microbiology and Parasitology, Faculty of Medicine, Bayero University, Kano, Nigeria




Inanimate objects which become contaminated with pathogenic bacteria and then spread infection to others are often referred to as fomites. Most outbreaks of infection associated with inanimate objects are caused by items that should be sterile but have been contaminated [1].

The hypothesis that environmental microorganism cause human diseases arises from two facts, firstly, our interaction with the inanimate environment is constant and close, secondly environmental objects are usually contaminated often with important human pathogens. Unfortunately, though it is fairly easy to assess the prevalence of microorganism in the environment, it is relatively difficult to establish the role the organisms in the environment play in causing human disease [2].

There are no systematic studies of the relative importance of various environmental factors in ensuring a safe operating room environment; however it is known that contaminated fluid or equipment in the operating room may result in contamination of surfaces and lead to outbreaks of wound infection with Pseudomonas aeruginosa or Serratia marcescens [3].

In the study carried out by Maki and his colleagues [4] in trying to assess the relationship between organism on environmental surface and nosocomial infection, they virtually ruled out the environment as a significant vector for nosocomial infections. However the limitations in the study is that the two pathogens for which environmental contact is of primary importance,Aspergillus and Legionella were not assessed neither were environmental culture processed for anaerobes e.g. Clostridium difficille, Klebsiella [5], Pseudomonas [6] and other gram negative organisms can be recovered from hospital areas, but the best correlation with patient acquisition is hand borne rather than air borne organism [7]. Although it has always been acknowledged that bacterial pathogens in fomites could be a possible risk factor in nosocomial infection, there is no study to confirm the presence of such pathogens in this locality. This is the focus of the present research.




Sterile cotton wool swab sticks were prepared by making the cotton wool end wet with physiological saline. These were used to swab various items in the operating room theatre. From 30 sources in three (3) operating theatres, a total of 900 consecutive duplicate samples (1,800 samples) were collected. Sixty (60) samples were collected weekly before surgery for 30 weeks at the Murtala Mohammed Specialist Hospital MMSH, Kano between January and August 2009. While 1,620 samples were collected from 27 sources in the three operating rooms namely; Operating Lamp (OPL), Floor (FL), Wall (WL), Sink (SK), Suction tube (ST), Forceps (FC), Scissors (SC), Trolley (TR) and Anesthetic machine (ANM), one hundred and eighty (180) samples were obtained from three operation beds by sweep plate method. The theatre rooms screened were Main, Gynecology and Maternity. Two swab sticks were used for each item. While one was used for aerobic cultures, the other was used for fungal screening. Anaerobic cultures were not done. While the swab stick for bacterial culture were inoculated on MacConkey, Manitol salt and blood agar plates and incubated at 37°C for 18-24 hrs, those for fungal screening were inoculated on sabourad dextrose agar and incubated at room temperature for 72 hours. Samples for sweep plate method were collected with blood and sabourad dextrose agar plates. The former was incubated at 37°C for 18-24hrs while the later was incubated at room temperature for 72 hours.

Bacterial and fungal isolates were identified by standard microbiological techniques at Aminu Kano Teaching Hospital (AKTH) Kano [8]. Antibiotic susceptibility tests were carried out according to Bauer et al [9]. Overnight peptone water culture of the isolates were marched with McFarland turbidity standard 0.5 and spread over the surface of Mueller-Hinton agar with the help of a swab stick and allowed to dry. Antibiotic discs were placed on the surface of the medium with the aid of sterile forceps. This was incubated at 18-24 hrs at 37oC and the sensitivity plates interpreted by comparing the zones of inhibition according to CLSI 2010 Standards [10]. Staphylococcus aureus ATCC 25923, Escherichia coli ATCC 25922 and Pseudomonas aeruginosa ATCC 27853 obtained from AKTH were used as control organisms. Antibiotics (oxoid) disc potency were as follows Gentamicin(CN) 10g, Ceftazidime(CAZ) 30g, Ofloxacin(OFL) 10g, Cloxacillin (CXC) 10g, Ceftriaxone (CRO) 30g, Ciprofloxacin (CIP) 10g, Amoxycillin/Clavulanate (AMC) 30g, Tetracycline (TE) 10g, Cotrimoxazole (COT) 10g, Cefuroxime(CXM) 30g. Simple percentages were used to analyze the results.




Out of 900 samples screened for bacteria, 210(23.3%) yielded growth, while 120(57.1%) were recognized clinical pathogens. Also out of another 900 samples screened for fungal growth, 26(2.89%) yielded growth. A total of 1800 samples yielded 236(13.1%) fungal and bacterial isolates in the study. Table 1 shows the rate of contamination of various items in the Main theatre. The suction tube was the most contaminated with bacterial and fungal organisms, Pseudomonas aeruginosa, Proteus mirabilis and Aspergillus spp were observed. Table 2 shows the Gynaecology theatre with the least contamination of items. Both the forceps, scissors, trolley, anesthetic machine, operating lamp and walls showed no bacterial contamination. Pseudomonas aeruginosa and Streptococcus spp. were isolated from sink and suction tip respectively. Table 3 shows the items examined and the different bacterial and fungal isolates seen in the Maternity theatre. The suction tip was the most contaminated with bacterial infection such as Enterococcus faecalis, Pseudomonas aeruginosa and Proteus vulgaris. The forceps were not infected in the study. Table 4 shows microorganisms isolated from the theatre operation bed. The clinically important pathogens isolated from the theatre operating bed includes coagulase negative Staphylococcus (COANS), Proteus spp., E. coli and Streptococcus spp. The presence of fungi of various species, Rhizopus, Mucor and penicillin were also observed. Table 5 shows the pattern of bacterial pathogens isolated from fomites. Coagulase negative Staphylococcus was the most frequently isolated bacteria 34(28.3%) followed by P. aeruginosa 28(23.3%), Strept spp. 22(18.3%), P. mirabilis 12(10.0%) while the least were S. aureus 1(0.83%) and Salmomella cholerasius 1(0.83%). Table 6 shows the antibiotic sensitivity pattern of bacterial pathogens isolated from fomites in the operating room theatre. The quinolone (Ofloxacin) and the cephalosporin (Ceftriaxone) showed encouraging results. The tetracycline and cotrimoxazole show no sensitivity against the bacterial organism.




This study confirmed that various inanimate objects in the operating room theatre associated directly or indirectly with surgical procedures were variously contaminated with known bacterial and fungal pathogens. Although the direct involvement of these formites in disease transmission was not investigated in this study, the isolation of Coagulase Negative staphylococcus (COANS), Pseudomonas aerugionosa, Proteus mirabilis, Strept spp., S. aureus, E. feacalis, Salmonella choleraesius, Proteus vulgaris and E. coli including Aspergillus spp presents a serious concern for possible nosocomial transmission.

Some researchers [11] concluded in their study that the common nosocomial pathogens may well survive or persist on surfaces for months and can thereby be a continuous source of transmission if no regular prevention surface disinfection is performed. Although a researcher [12] remarked that the inanimate environment has little relevance to the spread of infection, other workers [13] noted that the fomites are involved in the transmission of pathogens in health care environments.

The results from this study in which established bacterial and fungal pathogens were isolated from fomites agrees with the findings of some workers [14] but varies with the reports of other researchers [15] who did not find any pathogenic bacteria on fomites from their study.

The presence of fungi as seen in the study confirms the contamination of air from outside the theatre. This same observation was made by some researchers [15]. In the present study, it was observed that the infection rate in the different operating theatre corresponded with the level of contamination of fomites observed. While the maternity ward had an infection rate of 38.4%, the main ward for general and specialist surgery had 33.8% followed by 17% in the gyneacology ward. Although these findings may not be as a direct result of contaminated fomites since the first two operating rooms receive a higher number of patients and more emergencies. Infection control practices should be strictly enforced. The incidence of multidrug resistance in gram negative bacilli and ESBL producers from clinical isolates is generating a lot of interest of late. Efforts should be made to ensure strict infection control practices whereby surfaces should be cleaned regularly to decontaminate fomites.




The finding of established bacterial and fungal pathogens on fomites portends danger for surgical patients. These pathogens can easily acquire antibiotic resistance and constitute a threat to the life of patients if they eventually find their way as aetiologic agents of surgical site infection. It will be necessary to establish regular surface cleaning intervention as part of effective infection control policy



Competing interests

The author declare no competing interests.




We thank members of staff of the various theatre, Microbiology department of Murtala Mohammed Specialist Hospital (MMSH) and Aminu Kano Teaching Hospital (AKTH) for their assistance.




Table 1: Main theatre - frequency of recovery and distribution of microorganism isolated from formites in the operating rooms at Murtala Mohammed Specialist Hospital

Table 2: Gyneacology theatre - frequency of recovery and distribution of microorganisms isolated from fomites in the operating rooms at Murtala Mohammed Specialist Hospital

Table 3: Maternity theatre - Frequency of recovery and distribution of microorganisms isolated from fomites in the operation rooms at Murtala Mohammed Specialist Hospital

Table 4: Microorganisms isolated from bedcover on the theatre operating room bed

Table 5: Pathogenic bacteria isolated from fomites in the operating room theatre at Murtala Mohammed Specialist Hospital

Table 6: Antibiotic sensitivity pattern of bacteria pathogens isolated from fomites in the operating rooms theatre at Murtala Mohammed Specialist Hospital




  1. Barrie D, et al. Contamination of hospital linen by Bacillus cereus. Epidemiol Infect. 1994 Oct;113(2):297-306. This article on PubMed

  2. Rhame FS. The inanimate environment in Hospital infections. 3rd edition edited by Beneth, JV and Brachman, PS. Little Brown and company (Inc) 1992 Pp 299 333

  3. Ehrenkranz NJ, et al. Antibiotic sensitivity Serratia marcescens infection complicating cardopulmunary operation: contaminated disinfectant as a reservoir. Lancet. 1980; 2:1289 . This article on PubMed

  4. Maki DG, et al. Relation of the inanimate hospital environment to endemic nosocomial infections. N Engl J med. 1982; 307: 1562. This article on PubMed

  5. Turner AG, Craddock JG. Klebsiella in a thoracic ICU. Hospitals. 1973 Jul 1;47(13):79-82. This article on PubMed

  6. Dexter F. Pseudomonas aeruginosa in a regional burn centre. J Hyg (Lond). 1971 Jun;69(2):179-86. This article on PubMed

  7. Bauer TM, Ofner E, Just HM, Just H, Daschner FD. An epidemiological study assessing the relative importance of airborne and direction contact transmission of microorganism in a medical intensive care unit. J Hosp Infect. 1990 May;15(4):301-9. This article on PubMed

  8. Cheesbrough M. Medical Laboratory Manual for tropical countries co- published by Tropical Health Technology. Microbiology. 1993; 2:225 288

  9. Bauer WA, et al. Antibiotic susceptibility by standard single disc method. Amer J Clin Path. 1966; 45(4):493-496

  10. CLSI Clinical and Laboratory standards institute. Performance standards for antimicrobial susceptibility teating. Twentieth informational supplement. 2010; 30(1):M100-S20

  11. Kramer A, et al. How long do nosocomial pathogens persist on inanimate surfaces? A systematic review. BMC infectious diseases. 2006; 6(1):130. This article on PubMed

  12. Ayeliffe GAJ. Role of the Environment of the operating suite in surgical wound infection. Reviews of infectious diseases. 1991; 13(10):S800-S804. This article on PubMed

  13. Prescott LM, Harley JP, Klein DA. Microbiology 4th (ed) New York Mc graw Hill companies 1999; 584, 731. . . This article on PubMed

  14. Orji MU, et al. Isolation of pathogenic bacteria from hospital staff apparel in NIGERIA. Malawi medical journal. 2005; 17(4):128-130

  15. Njoku-Obi AN, Ojiegbe GC.. Bacterial air contamination of operating theatres and surgical wards of a University Teaching Hospital. Afr J Med Med Sci. 1993 Jun;22(2):19-23. This article on PubMed



















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